Measuring thermal rupture force distributions from an ensemble of trajectories.
نویسندگان
چکیده
Rupture, bond breaking, or extraction from a deep and narrow potential well requires considerable force while producing minimal displacement. In thermally fluctuating systems, there is not a single force required to achieve rupture, but a spectrum, as thermal forces can both augment and inhibit the bond breaking. We demonstrate measurement and interpretation of the distribution of rupture forces between pairs of colloidal particles bonded via the van der Waals attraction. The otherwise irreversible bond is broken by pulling the particles apart with optical tweezers. We show that an ensemble of the particle trajectories before, during and after the rupture event may be used to produce a high fidelity description of the distribution of rupture forces. This analysis is equally suitable for describing rupture forces in molecular and biomolecular contexts with a number of measurement techniques.
منابع مشابه
Measuring the Similarity of Trajectories Using Fuzzy Theory
In recent years, with the advancement of positioning systems, access to a large amount of movement data is provided. Among the methods of discovering knowledge from this type of data is to measure the similarity of trajectories resulting from the movement of objects. Similarity measurement has also been used in other data mining methods such as classification and clustering and is currently, an...
متن کاملSingle-molecule mechanics: new insights from the escape-over-a-barrier problem.
T he early description of the living cell as a reaction vessel of molecules undergoing random collisions has evolved to a much more interesting picture of a small chemical factory of complex and dynamic molecular structures that carry out specialized functions in a highlycoordinated fashion. Traditional solution biochemistry has had extraordinary success in elucidating molecular structures of t...
متن کاملDistributions of Parameters and Features of Multiple Bond Ruptures in Force Spectroscopy by Atomic Force Microscopy
Force spectroscopy measurement of rupture forces of bound molecules becomes an important physicochemical tool in characterizing intermolecular interactions. Atomic force microscopy (AFM) measurements are among the most common approaches in implementation of this technique. Kinetic information about the molecular bond under study is usually extracted assuming that the detected rupture force come...
متن کاملMechanical unfolding of RNA hairpins.
Mechanical unfolding trajectories, generated by applying constant force in optical-tweezer experiments, show that RNA hairpins and the P5abc subdomain of the group I intron unfold reversibly. We use coarse-grained Go-like models for RNA hairpins to explore forced unfolding over a broad range of temperatures. A number of predictions that are amenable to experimental tests are made. At the critic...
متن کاملCooperative effect of load and disorder in thermally activated rupture of a 2d random fuse network
A random fuse network, or equivalently a 2d spring network with quenched disorder, is submitted to a constant load and thermal noise, and studied by numerical simulations. Rupture is thermally activated and the lifetime follows an Arrhenius law where the energy barrier is reduced by disorder. Due to the non-homogenous distribution of forces from stress concentration at microcracks’ tips, spatia...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
- Physical review letters
دوره 109 19 شماره
صفحات -
تاریخ انتشار 2012